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Original papers

  1. Fukuyama T, Ebata H, Kondo Y, Kidoaki S, Aoki K, and Maeda YT
    Why epithelial cells collectively move against a traveling signal wave
    arXiv:2008.12955
  2. Ienaga R, Beppu K, and Maeda YT
    Geometric confinement guides topological defect pairings and emergent flow in nematic cell populations
    Soft Matter 19, 5016-5028 (2023)
  3. Negi A, Beppu K, and Maeda YT
    Geometry-induced dynamics of confined chiral active matter
    Physical Review Research 5, 023196 (2023)
  4. Sakamoto R, Miyazaki M, and Maeda YT
    State transitions of a confined actomyosin system controlled through contractility and polymerization rate
    Physical Review Research 5, 013208 (2023)
  5. Fukuyama T, Yan LC, Tanaka M, Yamaoka M, Saito K, Ti SC, Liao CC, Hsia KC, Maeda YT* and Shimamoto Y*
    Morphological growth dynamics, mechanical stability, and active microtubule mechanics underlying spindle self-organization
    Proc. Natl. Acad. Sci. USA 119, e2209053119 (2022)
  6. Sakamoto R, Izri Z, Shimamoto Y, Miyazaki M, and Maeda YT
    Geometric trade-off between contractile force and viscous drag determines the actomyosin-based motility of a cell-sized droplet
    Proc. Natl. Acad. Sci. USA 119, e2121147119 (2022)
  7. Shigeta K, Fukuyama T, Takahashi R, Beppu K, Tanaka A, and Maeda YT
    Collective motion of epithelial cells along a wrinkled 3D-buckled hydrogel
    RSC Advances 12, 20174-20181 (2022)

  8. Maeda YT
    Negative autoregulation controls size scaling in confined gene expression reactions
    Scientific Reports 12, 10516 (2022)
  9. Kikuchi K, Fukuyama T, Uchihashi T, Furuta T, Maeda YT, and Ueno T
    Protein needles designed to self-assemble through needle tip engineering
    Small 18, 210641 (2022)
  10. Araki S, Beppu K, Kabir AMR, Kakugo A, and Maeda YT
    Controlling collective motion of kinesin-driven microtubules via patterning of topographic landscapes
    Nano Letters 21, 10478-10485 (2021)
  11. Beppu K, Izri Z, Sato T, Yamanishi Y, Sumino Y, and Maeda YT
    Edge current and pairing order transition in chiral bacterial vortices
    Proc. Natl. Acad. Sci. USA 118, e2107461118 (2021)
  12. Kato S, Garenne D, Noireaux V, and Maeda YT
    Phase separation and protein partitioning in compartmentalized cell-free expression reactions
    Biomacromolecules 22, 3451-3459 (2021)
  13. Sakamoto R, Tanabe M, Hiraiwa T, Suzuki K, Ishiwata S-i, Maeda YT, and Miyazaki M
    Tug-of-war between actomyosin-driven antagonistic forces determines the positioning symmetry in cell-sized confinement
    Nature Communications 11, 3063 (2020)
  14. Shiraki TY, Kamei K, and Maeda YT
    Randomness and optimality in enhanced DNA ligation with crowding effects
    Physical Review Research 2, 013360 (2020)
  15. Takagi J, Sakamoto R, Shiratsuchi G, Maeda YT, and Shimamoto Y
    Mechanically distinct microtubule arrays determine the length and force response of the meiotic spindle
    Developmental Cell 49, 267-278 (2019)
  16. Izri Z, Garenne D, Noireaux V, and Maeda YT
    Gene expression in on-chip membrane-bound artificial cells
    ACS Synthetic Biology 8, 1705-1712 (2019)
  17. Sakamoto R, Noireaux V, and Maeda YT
    Anomalous scaling of gene expression in confined cell-free reactions
    Scientific Reports 8, 7364 (2018)
  18. Fukuyama T, Nakama S, and Maeda YT
    Thermal molecular focusing: Tunable cross effect of phoresis and light-driven hydrodynamic focusing
    Soft Matter 14, 5519-5524 (2018)
  19. Beppu K, Izri Z, Gohya J, Eto K, Ichikawa M, and Maeda YT
    Geometry-driven collective ordering of bacterial vortices
    Soft Matter 13, 5038-5043 (2017)
  20. Fukuyama T, Fuke A, Mochizuki M, Kamei K, and Maeda YT
    Directing and boosting of cell migration by the entropic force gradient in polymer solution
    Langmuir 31, 12567-12572 (2015)
  21. Ohmura T, Ichikawa M, Kamei K, and Maeda YT
    Oscillation and collective conveyance of water-in-oil droplets by microfluidic bolus flow
    Applied Physics Letters 107, 074102 (2015)
  22. Maeda YT
    (2+1)-Dimensional manipulation of soft biological materials by opto-thermal-diffusiophoresis
    Applied Physics Letters 103, 243704 (2013)
  23. Maeda YT, Tlusty T, and Libchaber A
    Effects of long DNA folding and small RNA stem-loop in thermophoresis
    Proc. Natl. Acad. Sci. USA 109, 17972-17977 (2012)
  24. Maeda YT, Nakadai T, Shin J, Uryu K, Noireaux V, and Libchaber A
    Assembly of MreB filaments on liposome membranes: A synthetic biology approach
    ACS Synthetic Biology 1, 53-59 (2012)
  25. Maeda YT, Buguin A, and Libchaber A
    Thermal separation: Interplay between the Soret effect and entropic force gradient
    Physical Review Letters 107, 038301 (2011)
  26. Shimamoto Y, Maeda YT, Ishiwata S, Libchaber AJ, and Kapoor TM
    Insights into the micromechanical properties of the metaphase spindle
    Cell 145, 1062-1074 (2011)
  27. Noireaux V, Maeda YT, and Libchaber A
    Development of an artificial cell, from self-organization to computation and self-reproduction
    Proc. Natl. Acad. Sci. USA 108, 3473-3480 (2011)
  28. Tokita R, Katoh T, Maeda YT, Wakita J, Sano M, Matsuyama T, and Mastushita M
    Pattern formation of bacterial colonies by Escherichia coli
    Journal of Physical Society of Japan 78, 074005 (2009)
  29. Maeda YT, Inose J, Matsuo MY, Iwaya S, and Sano M
    Ordered patterns of cell shape and orientational correlation during spontaneous cell migration
    PLoS ONE 3, e3734 (2008)
  30. Delanoye-Ayari H, Iwaya S, Maeda YT, Inose J, Rivlere C, Sano M, and Rieu J-P
    Changes in the magnitude and distribution of forces at the different Dictyostelium developmental stages
    Cell Motility and the Cytoskeleton 65, 314-331 (2008)
  31. Maeda YT
    Quantitative Experimental Analysis of Synthetic Gene Networks
    Bussei Kenkyu 85(5), 685-721 (2006)
  32. Maeda YT and Sano M
    Regulatory Dynamics of Synthetic Gene Networks with Positive Feedback
    Journal of Molecular Biology 359, 1107-1124 (2006)

Review articles

1. Sakamoto R, Maeda YT
Unveiling the physics underlying symmetry breaking of the actin cytoskeleton: An artificial cell-based approachs
Biophysics and Physicobiology 20, e200032 (2023)

2. 島本勇太, 前多裕介, 斎藤慧
紡錘体のかたちづくり
生物物理 63(4) 193-195 (2023)

3. 坂本遼太
狭い空間の細胞運動を司る力学的原理ー人工細胞による構成的理解ー
生物物理 63(3), 163-164 (2023)

4. Beppu K, Maeda YT
Exploring order in active turbulence: Geometric rule and pairing order transition in confined bacterial vortices
Biophysics and Physicobiology 19, e190020 (2022)

5. 金原 数, 飯野亮太, 竹内正之, 前多裕介
はたらく分子マシン:ナノ世界のエネルギー変換へ
現代化学 612,46-50 (2022)

6. 前多裕介, 加藤修三, 福山達也
ソフトマターで分子を運ぶ, 選り分ける
現代化学 607,46-49 (2021)

7. 前多裕介, 白井瑞穂
遺伝情報高分子の非平衡現象と生命の起源
高分子 70, 563-564 (2021)

8. 坂本遼太, 前多裕介, 宮﨑牧人
細胞核はどこにあるか - アクティブ・ゲルと配置対称性の制御原理
日本物理学会誌 76, 595-600 (2021)

9. 坂本遼太, 前多裕介
構成的アプローチで探る「発動する人工細胞」の設計原理
化学と工業 73(6), 463-465 (2020)

10. Fukuyama T, Maeda YT
Optothermal diffusiophoresis of soft biological matters: From physical principle to molecular manipulation
Biophysical Reviews 12, 309-315 (2020)

11. 前多裕介, 別府航早
遊泳バクテリアで探るアクティブマターの秩序と制御
生物物理 60(1), 13-18 (2020)

12. Beppu K*, Izri Z*, Maeda YT, Sakamoto R*
Geometric effect for biological reactors and biological fluids
Bioengineering 5, 110 (2018) *equally contributed

13. 前多裕介, 坂本遼太, 白木天晴
セルフリー合成生物学
生体の科学 69(3), 269-274 (2018)

14. 前多裕介
界面駆動の流動と輸送:生命を捉える非平衡力学
物性研究 電子版6(4), 064226 (2017)

15. 前多裕介, 福山達也
温度勾配・濃度勾配の共存下での生体高分子の非平衡輸送現象
日本物理学会誌 71, 746-751 (2016)

16. 前多裕介
微小系の分子輸送:生命の起源と分子操作
生化学 85, 299-303 (2013)